CDS

Accession Number TCMCG057C33942
gbkey CDS
Protein Id XP_018440560.1
Location complement(join(26934810..26934887,26934982..26935041,26935132..26935200,26935282..26935333,26935425..26935549,26935655..26935726,26935820..26935894,26935970..26936032,26936143..26936244,26936348..26936455,26936634..26936717,26937025..26937135,26937259..26937330,26937432..26937506,26937584..26937709,26937777..26937875,26937970..26938083,26938153..26938266,26938363..26938422,26938502..26938531,26938624..26938680,26938791..26938857,26938974..26939059,26939150..26939200,26939308..26939388,26939472..26939549,26939669..26939758,26939835..26940122,26940535..26940717))
Gene LOC108812721
GeneID 108812721
Organism Raphanus sativus

Protein

Length 889aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA344915
db_source XM_018585058.1
Definition PREDICTED: transportin-1-like isoform X3 [Raphanus sativus]

EGGNOG-MAPPER Annotation

COG_category UY
Description attrn1,trn1
KEGG_TC 1.I.1
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko03009        [VIEW IN KEGG]
ko03019        [VIEW IN KEGG]
KEGG_ko ko:K18752        [VIEW IN KEGG]
EC -
KEGG_Pathway -
GOs GO:0000060        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0005048        [VIEW IN EMBL-EBI]
GO:0005215        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005635        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005829        [VIEW IN EMBL-EBI]
GO:0006606        [VIEW IN EMBL-EBI]
GO:0006607        [VIEW IN EMBL-EBI]
GO:0006610        [VIEW IN EMBL-EBI]
GO:0006810        [VIEW IN EMBL-EBI]
GO:0006886        [VIEW IN EMBL-EBI]
GO:0006913        [VIEW IN EMBL-EBI]
GO:0008104        [VIEW IN EMBL-EBI]
GO:0008139        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008565        [VIEW IN EMBL-EBI]
GO:0009892        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010468        [VIEW IN EMBL-EBI]
GO:0010605        [VIEW IN EMBL-EBI]
GO:0010608        [VIEW IN EMBL-EBI]
GO:0010629        [VIEW IN EMBL-EBI]
GO:0012505        [VIEW IN EMBL-EBI]
GO:0015031        [VIEW IN EMBL-EBI]
GO:0015833        [VIEW IN EMBL-EBI]
GO:0016020        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0016441        [VIEW IN EMBL-EBI]
GO:0016458        [VIEW IN EMBL-EBI]
GO:0017038        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0022607        [VIEW IN EMBL-EBI]
GO:0022613        [VIEW IN EMBL-EBI]
GO:0022618        [VIEW IN EMBL-EBI]
GO:0031047        [VIEW IN EMBL-EBI]
GO:0031090        [VIEW IN EMBL-EBI]
GO:0031965        [VIEW IN EMBL-EBI]
GO:0031967        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031975        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0033036        [VIEW IN EMBL-EBI]
GO:0033218        [VIEW IN EMBL-EBI]
GO:0033365        [VIEW IN EMBL-EBI]
GO:0034399        [VIEW IN EMBL-EBI]
GO:0034504        [VIEW IN EMBL-EBI]
GO:0034613        [VIEW IN EMBL-EBI]
GO:0034622        [VIEW IN EMBL-EBI]
GO:0035194        [VIEW IN EMBL-EBI]
GO:0035195        [VIEW IN EMBL-EBI]
GO:0035280        [VIEW IN EMBL-EBI]
GO:0040029        [VIEW IN EMBL-EBI]
GO:0042277        [VIEW IN EMBL-EBI]
GO:0042886        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0043933        [VIEW IN EMBL-EBI]
GO:0044085        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0045184        [VIEW IN EMBL-EBI]
GO:0046907        [VIEW IN EMBL-EBI]
GO:0048519        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0051169        [VIEW IN EMBL-EBI]
GO:0051170        [VIEW IN EMBL-EBI]
GO:0051179        [VIEW IN EMBL-EBI]
GO:0051234        [VIEW IN EMBL-EBI]
GO:0051641        [VIEW IN EMBL-EBI]
GO:0051649        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0065003        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0070727        [VIEW IN EMBL-EBI]
GO:0070922        [VIEW IN EMBL-EBI]
GO:0071702        [VIEW IN EMBL-EBI]
GO:0071705        [VIEW IN EMBL-EBI]
GO:0071826        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0072594        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGCGGCGACGACTGTGTGGCAGCCCCGAGAAGATGGCCTCGCTGAGATCTTCACTCTCCTCGAACAACAGATTTCTCCTTCCTCCGTTGCTGACAAGTCTCAGATTTGGAAGCAGCTCGAGCACTTCTCTCAGTTCCCTGATTTCAATAACTATCTCGTCTTCATCCTCGTCCGCGCTGAGGGTAAGTCCATAGGGCTTCGTCAAGCTGCTGGATTGCTGCTGAAAAACAATTTGAAGCGTGTATGGATATCTATGGTTCAAGAAAACCAAAAATACATCAAATCGGAGCTGCTGCCTTGTCTAGGAGCTGTGGACAGACATATTAGGACAACTGTTGGAACCATCATCAGTGAAATTGTTAATGTAGAGGGGGTTGCTGGATGGCTCGAGCTTTTGCCAGCTCTTGTCAGTTGTTTAGACAGTAATGATCTGAATCACATGGATGGTGCAATGGATGCATTGTCAAAGATTTGTGAGGATATCCCTCAAGTATTGGATTCAGAAGTGCCTGGTTTAGCACAACGCCCTATCAACATTTTCTTGCCTAGGCTATATCAGTTTTTCCAGTCTCCCCATGCTTCACTGAGGAAGCTTGCCTTGGGTTGTGTGAACCAATATGTCATCATAATGCCTGCTGCTTTGTATAATTCTATGGATAAGTACCTTCAGGGGTTGTTTGTCCTTGCCAATGATCCTGTAGCAGAAGTCAGAAAATTAGTCTGCGCAGCATTTGTGCATCTGACGGAAGTCCTCCCCTCGTCAATAGAGCCACATCTCAGGAATGTAATGGAATACATGCTACAAGTCAACAAAGACCCTGATGAAGAAGTTGCTCTTGAAGCATGTGAATTCTGGTCTGCATACTGTGATGCGCAGCTACCGACAGAGAACTTAAAAGAGTTTCTGCCACGCCTTATTCCAGTGTTGCTCTCAAACATGGCTTATGCCGATAACGACGAGTCGCTTTTGGAGGCTGAGGAAGATGAGTCTCAACCAGACAGAGATCAGGATTTGAAACCTCGTTTCCATACATCAAGACTTCATGGATCAGAGGATTTTGATGACGATGATGATGACTCGTTCAACGTGTGGAATTTAAGAAAGTGCAGTGCAGCAGCTATTGACGTTCTCTCTAATGTATTTGGAGATGAAATCCTTCCAGCACTCATGCCCCTTATTCAGGCAAAATTATCAGCTTCTGGTGATGAGGCCTGGAAAGAAAGAGAGGCTGCTGTTTTGACCCTCGGGGCTATTGCTGAAGGCTGCTTTAATGGTCTTTACCCTCTCTTGTCCGAGATCGTAGCTTTTCTTCTTCCGCTTTTAGATGATAAATTCCCTCTCATAAGAAGCATATCTTGCTGGACGCTTTCTCGATTTGGAAAGTATCTCATCCAGGAAATTGGCAATCCAAAGGGTTACGAGCAGTTTGAGAAAGTTCTTATGGGTCTTCTCCGCAGACTCTTGGATTCGAACAAGCGGGTCCAGGAGGCTGCATGTTCAGCTTTTGCAACTGTTGAAGAGGATGCTGCTGAAGAGTTAGTCCCACACATGCAAGTAATACTGCAGCATCTAATGTGCGCCTTTGGAAAGTATCAGAGGAGGAACTTAAGAATTGTCTATGATGCTATTGGAACACTGGCAGATTCGGTTAGAGAAGATTTGAACAAGCCGGCTTATCTTGAGATCCTGATGCCTCCACTGGTCGCAAAGTGGCAACAACTTTCAAACTCAGACAAAGATCTATTTCCATTGCTGGAATGCTTCACATCTATTTCTCAGGCTTTAGGTGTGGGATTCGCTCCATTTGCTCAGCCTATTTTCCAGAGATGCATGGATATCATCCAACTACAACACCTCGCTAAGGTTGATCCTGCTTCTGCTGGGGCCCAGTACGACAGAGAATTCATTGTTTGTTCTCTTGATTTGCTTTCTGGGCTTACTGAAGGGCTTGGTAGTGGGATAGAGTCTCTGGTTTCACCAAGTAATCTCAGGGATCTGCTTCTCAAATGTTGCATGGATGAGGCTTCTGATGTCAGACAAAGTGCTTTTGCTCTTATGGGTGATCTTGCAAGAGTATTCCCAGCTTACCTACAACCCCGCATGGTTGAGTTCCTTGAAATTGCAAGTCAGCAACTGAGCGCAAACCTCATTAGAGAAAACCTTTCTGTCGCCAATAATGCTTGTTGGGCCATTGGAGAATTAGCGGTCAAGGTTCGTCAAGAAGTCTCACCGATTGTGACCAACGTTGTCTCTTCCCTAGGCCTAATTCTTCAGCATGGAGAGGCTGTCAATAAGTCACTAGTCGAAAACAGTGCAATTACCCTCGGGAGACTAGCATGGATTCGTCCAGACCTCGTCGCACCTCACATGGAGCACTTCATGAAGCCATGGTGCTTGGCATTGTCAACGGTACGTGATGACATTGAGAAAGAAGATGCATTTAGAGGGTTATGTGCAGTGGTTAAAGTGAATCCATCAGGAGGTGTCAGCTCACTTGTTTTCATATGCATAGCCATTGCAAGCTGGCATGAAATAAGAAGCGAGGACGTCAAAAACGAAGTCTCCCAAGTGCTGAACGGCTATAAACAGTTGCTGGGAAACTCATGGGCGGAATGTTTGTCTGCTTTGGAACCTCCTGTTAAAGAAAGGCTTGCGAGATACGTTTGA
Protein:  
MAATTVWQPREDGLAEIFTLLEQQISPSSVADKSQIWKQLEHFSQFPDFNNYLVFILVRAEGKSIGLRQAAGLLLKNNLKRVWISMVQENQKYIKSELLPCLGAVDRHIRTTVGTIISEIVNVEGVAGWLELLPALVSCLDSNDLNHMDGAMDALSKICEDIPQVLDSEVPGLAQRPINIFLPRLYQFFQSPHASLRKLALGCVNQYVIIMPAALYNSMDKYLQGLFVLANDPVAEVRKLVCAAFVHLTEVLPSSIEPHLRNVMEYMLQVNKDPDEEVALEACEFWSAYCDAQLPTENLKEFLPRLIPVLLSNMAYADNDESLLEAEEDESQPDRDQDLKPRFHTSRLHGSEDFDDDDDDSFNVWNLRKCSAAAIDVLSNVFGDEILPALMPLIQAKLSASGDEAWKEREAAVLTLGAIAEGCFNGLYPLLSEIVAFLLPLLDDKFPLIRSISCWTLSRFGKYLIQEIGNPKGYEQFEKVLMGLLRRLLDSNKRVQEAACSAFATVEEDAAEELVPHMQVILQHLMCAFGKYQRRNLRIVYDAIGTLADSVREDLNKPAYLEILMPPLVAKWQQLSNSDKDLFPLLECFTSISQALGVGFAPFAQPIFQRCMDIIQLQHLAKVDPASAGAQYDREFIVCSLDLLSGLTEGLGSGIESLVSPSNLRDLLLKCCMDEASDVRQSAFALMGDLARVFPAYLQPRMVEFLEIASQQLSANLIRENLSVANNACWAIGELAVKVRQEVSPIVTNVVSSLGLILQHGEAVNKSLVENSAITLGRLAWIRPDLVAPHMEHFMKPWCLALSTVRDDIEKEDAFRGLCAVVKVNPSGGVSSLVFICIAIASWHEIRSEDVKNEVSQVLNGYKQLLGNSWAECLSALEPPVKERLARYV